First Online EMBL PhD Symposium - Life Sciences - Shaping the Future
Feb. 2006 - Dec. 2006
The First Online EMBL
PhD Symposium took place on the web exclusively and the media file are
now available for everybody interested.
Web 2.0 and Science
May. 2005 - Jun. 2005
The web has undergone some changes in the last years which includes a
stronger involvement of users, more community interaction, mash-ups
of web-resources, the availability of web application with similar
power that which desktop applications offer and more. This new phenomenon
was dubbed as Web
2.0 and examples like Wikipedia, blogs, del.icio.us, and Google Maps are only some of
thousands. Science, living from communication of the
community, will be heavily influenced by these changes. I am
personally following these exciting developments and try to give my
impression, ideas, and collected knowledge to others. With three
other members of the EMBL Biocomputing Unit I gave a series of
talks that took place in May/June 2006 about the influence of Web 2.0
on science to the broader audience at EMBL. You can download talk
videos and presentation files.
My blog
2005 - ongoing
I have a blog
which has posts about society, hacking, open-source, open content,
politics, science and more at least once a week (well, I try to).
7th International EMBL PhD Student Symposium - Biology At Work
Nov. 2005 - Dec. 2006
Over the past few years volunteering EMBL PhD students have organized
an annual international PhD symposium. I was part of the organizing
team for the symposium that took place in Nov./Dec. 2005 called Biology At Work
which was dealing which the application of biological
research. During the course of a year we setup all that was needed
for such a meeting and had, in the end, around 150 participant from
all over the world, and very stimulating talks and discussions. It
was quite some effort but we learned a lot about organizing such an
event, others, and ourselves.
PhD thesis - Metagenomics
since 2004 - ongoing
The main focus of my research is Metagenomics
(also known as Environmental/Community Genomics). This is a new and
very promising approach for getting new insights into microbial
communities and their interaction with their habitats.
Diploma thesis - Comparative Genomics of the B. subtilis general stress response regulon
Dec. 2003 - Aug. 2004
The title of my diploma thesis at the Department for Microbial
Physiology and Molecular Biology was "Phylogenetic analysis of
the general stress response in bacteria". Based on the general
stress proteins of the soil bacterium Bacillus subtilis I did a comparative
analysis with about 30 bacteria. This project contained a lot of
high throughput data analysis.
First CGI applications
sometime during 2003
Protalizer
is a small protein analysis tool that I programmed for the Department
for Microbial Physiology and Molecular Biology of the EMAU. It has
also become a small function of the Sub2D-Database
and Protecs.
To be perfectly honest: I don't really think this tool had big impact
on the scientific community, but I had fun coding it at that time. :)
Saving the world
1980 - ongoing
The methods may have changed but the aim is still the same as for
many years...
